SAPRIN Mental Health Data Prize 2022 DDI.SAPRIN.SMHDP2022V1 Molulaqhooa Linda Maoyi Kobus Herbst Tinofa Mutevedzi Mark Collinson 2025-07-01 Nesstar Publisher Version 2 (July 2025) SAPRIN Mental Health Data Prize 2022 SAPRIN.SMHDP2022V1 Prof Mark Collinson Dr Kobus Herbst Prof Steve Tollman Prof Eric Maimela Prof Willem Hanekom

Agincourt Data Team

DIMAMO Data Team

AHRI Data Team

Steve Tollman

Eric Maimela

Willem Hanekom

Centre for High Performance Computing

Molulaqhooa Linda Maoyi Tinofa Mutevedzi Chodziwadziwa Kabudula Joseph Tlouyamma Dickman Gareta This dataset documentation is licensed under a Creative Commons Attribution-Non Commercial 4.0 International License. The dataset is shared in terms of the data-use agreement accepted at the time of data download. Nesstar Publisher Department of Science, Technology and Innovation SAPRIN Data Management Demographic Surveillance v1: Dataset for public distribution. This dataset was produced by the South African Population Research Infrastructure Network (SAPRIN), funded by the national Department of Science and Technology and hosted by the South African Medical Research Council. Mental Health, Covid-19 Mental Health, Covid-19 South Africa SAPRIN (South African Population Research Infrastructure Network) is a network of health and demographic surveillance sites in South Africa that consists of five Health and Demographic Surveillance System *(HDSS)* nodes located in South Africa, namely: 1) MRC/Wits University Agincourt HDSS in Bushbuckridge District, Mpumalanga, which has collected data since 1993. The nodal website is http://www.agincourt.co.za. 2) the University of Limpopo DIMAMO HDSS in the Capricorn District of Limpopo, which has collected data since 1996.The nodal website is: N/A. 3) the Africa Health Research Institute (AHRI) HDSS in uMkhanyakude District, KwaZulu-Natal, which has collected data since 2000. The nodal website is http://www.ahri.org. 4) the Gauteng Research Triangle Initiative for the Study of Population, Infrastructure and Regional Economic Development (GRT-INSPIRED) in Hillbrow, Johannesburg, and Atteridgeville and Melusi, Tshwane, Gauteng. The nodal website is: N/A. 5) and the Cape Town Surveillance through Healthcare Action Research Project (C-SHARP), Nomzamo and Bishop Lavis, Cape Town, Western Cape. The nodal website is: N/A. Individual and household interviews Eligibility covered all individuals who are between the ages of 14 and 24yrs on the 1st of January 2020 and resident within each of the three SAPRIN nodal sites. Residence was defined as intention to sleep the majority of time at the dwelling in these areas over a four-month period Event history data 2017 All individuals who are between the ages of 14 and 24yrs on the 1st of January 2020. All exposure episodes of these individuals from the start of exposure to the 30th of April 2022 are included in the dataset. The data on this Repository is not the result of a single questionnaire but is a result of harmonised data from three different sites longitudinally collected over more than twenty years using different questionnaires that varied over time and site. Not Applicable SAPRIN Data Management The user of the data acknowledges that the original collector of the data and the relevant funding agencies bear no responsibility for the data's use or interpretation or inferences based upon it. SAPRIN.MHDPIEE2022.NSDstat 0 24 Nesstar 200801 SAPRIN.MHDPISO2022.NSDstat 0 7 Nesstar 200801 SAPRIN.MHDPHHS2022.NSDstat 0 14 Nesstar 200801 SAPRIN.MHDPHHAS2022.NSDstat 0 5 Nesstar 200801 SAPRIN.MHDPICS2022.NSDstat 0 52 Nesstar 200801 SAPRIN.MHDPHHCS2022.NSDstat 0 84 Nesstar 200801 SAPRIN Node identifier 0 0 Unique individual identifier 0 0 Date of birth 0 Date of death 0 The calendar year in which the episode false 0 0 The age in completed years of the individual 0 0 Sex of individual 0 0 1 Male 2 Female 3 Unknown Where individual was resident, household residence if non-resident 0 0 Unique household identifier of the household the individual is a member of 0 0 Relationship to head of household at start of episode 0 0 1 Head 2 Spouse 3 Child 4 Son/Daughter-inlaw 5 Grandchild 6 Parent 7 Parent-inlaw 8 Grandparent 9 Sibling 10 Other relative 11 Domestic worker/tenant 12 Unrelated/Other Settlement pattern at location 0 0 Mother's IndividualId 0 0 Father's IndividualId 0 0 IndividualId of spouse - not available 0 0 Start date of episode (inclusive) 0 End date of episode (inclusive) 0 What triggered this episode start? 0 0 1 Born 2 Enumeration 3 Residency start 4 External residency start 5 Participation restart 6 Attribute change How did this episode end? 0 0 1 Died 2 Residency end 3 External residency end 4 Refusal 5 Lost to follow-up 6 Attribute change 7 Current This episode number (first=1, last=Episodes) 0 0 Total number of episodes for individual 0 0 Whether individual is resident for duration of episode 0 0 -1 Unknown/Missing 0 No 1 Yes Status of mother for duration of episode 0 0 0 Unknown 1 Coresident 2 Alive 3 Dead Status of father for duration of episode 0 0 0 Unknown 1 Coresident 2 Alive 3 Dead Number of children ever born to individual 0 0 Saprin Node identifier 0 0 1 Agincourt 2 DIMAMO 3 AHRI Unique individual identifier (anonymised) 0 0 Date of status observation 0 Education status during this period 0 0 -1 Unknown 0 Grade 0 1 Grade 1 2 Grade 2 3 Grade 3 4 Grade 4 5 Grade 5 6 Grade 6 7 Grade 7 8 Grade 8 9 Grade 9 10 Grade 10 11 Grade 11 12 Grade 12 13 Special School 21 Higher Certificate 22 National Diploma 23 Degree 24 Honours 25 Masters 26 Doctors 31 ABET 1 32 ABET 2 33 ABET 3 34 ABET 4 41 FET 1 42 FET 2 43 FET 3 50 LT 1 year 51 Creche 96 Refused 97 Not Applicable 98 No education 99 Not attending 999 Missing Partnership status during this period 0 0 0 Missing/Refused 1 No Partnership 2 Marital Partnership 3 Regular Partnership 4 Casual Partnership(s) 999 Missing Health status during this period 0 0 0 Missing 1 Excellent 2 Good 3 Fair 4 Poor 999 Missing Employment status during this period 0 0 0 Unknown 1 Studying 2 Looking for work 3 Retired 4 Sick/injured 5 Pregnant/Child Care 6 Other Child Care 7 Care for sick/injured 8 Retrenched 9 Nothing 10 Other 11 Don't know 12 Refused 13 Seasonal 14 Disabled 15 Employed 16 Part-time employment 17 Pensioner 18 Not looking 19 Household duties/care 20 Self-employed 21 Unemployment 999 Missing Saprin Node identifier 0 0 1 Agincourt 2 DIMAMO 3 AHRI Household proxy respondent identifier (anonymised) linkable to IndividualID in e 0 0 Date of Birth of household proxy respondent 0 Sex of household proxy respondent 0 0 0 None/Missing 1 Male 2 Female Household Id linkable to householdId in episode data 0 0 Date of status observation 0 The most commonly used source of drinking water 0 0 0 Missing/Refused 1 Piped to stand/house 2 Piped - Public tap/kiosk 3 Borehole/well 4 Rainwater 5 Flowing river/stream 6 Dam/standing water 7 Protected spring 8 Water carrier or tanker 10 Other purified watersource 11 Other unpurified watersource What kind of toilet does the household use? 0 0 0 Missing/Refused 1 Flush 2 Ventilated Improved Pit 3 Other Pit Latrine 4 Bucket 5 Chemical 6 None 8 Don't know 11 Other type Is the household connected to the electricity grid? 0 0 0 No 1 Yes What is the main fuel used for cooking? 0 0 0 Missing/Refused 1 Wood 2 Gas (LPG) 3 Coal 4 Electricity 5 Paraffin 6 Other 89 None What are the construction materials of the walls? 0 0 0 Missing/Refused 1 Brick 2 Cement 3 Other modern material 4 Stabilised mud 5 Traditional mud 6 Wood 7 Other informal structure 8 Tiles 20 Other What are the construction materials of the floor? 0 0 0 Missing/Refused 1 Brick 2 Cement 3 Other modern material 6 Wood 8 Tiles 9 Modern carpet 10 Other modern material 11 Dirt 12 Mat 13 Other traditional 20 Other Has any resident member of the household been a victim of any of these crimes in 0 0 0 Missing/Refused 1 None 2 Theft 4 Assault 8 Murder 10 Theft & Murder 12 Assault & Murder 14 Theft, Assault & Murder 16 Other crime 18 Theft & other crime 20 Assault & other crime 22 Theft, Assault & other crime 26 Theft, murder & other crime 28 Assault, murder and other crime 30 Theft, assault, murder & other crime How would the household classify its financial situation these days ? 0 0 0 Missing/Refused 1 Extremely poor 2 Poor 3 Just getting by 4 Comfortable 5 Very comfortable Saprin Node identifier 0 0 1 Agincourt 2 DIMAMO 3 AHRI Household Id linkable to householdId in episode data 0 0 Date of status observation 0 Asset kind 0 0 1 Telephone 2 Cellphone 3 PrimusCooker 4 HotPlate 5 Stove 6 GasCooker 7 Fridge 8 Kettle 9 Television 10 DVD 11 Radio 12 SewingMachine 13 BlockMaker 14 Car 15 Motorcycle 16 Bicycle 17 Microbus 19 Bed 20 Table 21 Sofa 22 KitchenSink 23 SolarPanel 24 Wheelbarrow 25 Spade 26 BedNets 27 Cattle 28 OtherLivestock 100 Cart 101 Chicken 102 DSTV 103 ElectricIron 104 ElectricLights 105 Goats 106 Heater 107 Microwave 108 Sheep Asset status 0 0 0 Refused/Missing 1 Present 2 Absent Saprin Node identifier 0 0 1 Agincourt 2 DIMAMO 3 AHRI Unique individual identifier (anonymised) 0 0 Date of status observation 0 Date of Birth of Individual 0 PHQ2_1 0 0 1 Not at all 2 Several days 3 More than half the days 4 Nearly every day PHQ2_2 0 0 1 Not at all 2 Several days 3 More than half the days 4 Nearly every day GAD2_1 0 0 1 Not at all 2 Several days 3 More than half the days 4 Nearly every day GAD2_2 0 0 1 Not at all 2 Several days 3 More than half the days 4 Nearly every day rk12 0 0 1 Yes 2 No 98 Don?t know rk13 0 0 1 Not at all 2 Slightly concerned 3 Moderately concerned 4 Very concerned 5 Not applicable rk11 0 0 1 Certain 2 Very likely 3 Somewhat likely 4 Not very likely 5 No chance at all 6 I?ve already had Covid-19 98 Don?t know xx13 0 0 1 Strongly agree 2 Agree 3 Neither agree nor disagree 4 Disagree 5 Strongly disagree xx15 0 0 1 Strongly agree 2 Agree 3 Neither agree nor disagree 4 Disagree 5 Strongly disagree xx16 0 0 1 Strongly agree 2 Agree 3 Neither agree nor disagree 4 Disagree 5 Strongly disagree xx17 0 0 1 Strongly agree 2 Agree 3 Neither agree nor disagree 4 Disagree 5 Strongly disagree prior_covid_test 0 0 1 Yes 2 No 98 Don?t know prior_covid_dx 0 0 1 Yes 2 No 98 Don?t know prior_covid_dx_date 0 prior_covid_hosp 0 0 1 Yes 2 No 98 Don?t know vaccinated_covid 0 0 1 Yes 2 No 3 Don't know dose2_vaccinated 0 0 1 Yes 2 No 3 Don't know dose1_date 0 dose2_date 0 va12_1 0 0 va12_2 0 0 va12_3 0 0 va12_4 0 0 va12_5 0 0 va12_6 0 0 va12_7 0 0 va12_8 0 0 va12_none 0 0 va12_other 0 0 va14_1 0 0 va14_10 0 0 va14_11 0 0 va14_12 0 0 va14_13 0 0 va14_2 0 0 va14_3 0 0 va14_4 0 0 va14_5 0 0 va14_6 0 0 va14_7 0 0 va14_8 0 0 va14_9 0 0 va14_none 0 0 va12__99 0 0 va12__100 0 0 va14__99 0 0 va14__100 0 0 va14_14 0 0 Saprin Node identifier 0 0 1 Agincourt 2 DIMAMO 3 AHRI Source of Household Data (F= Field, C= Call Centre) 0 0 Unique proxy household identifier (anonymised) 0 0 Unique household identifier (anonymised) 0 0 sex of proxy respondent 0 0 1 Male 2 Female Date of Birth of proxy respondent 0 Date of status observation 0 ar01 0 0 -999999999 Missing 1 Yes 2 No 3 Don't Know ar03__1 0 0 ar03__2 0 0 ar03__3 0 0 ar03__4 0 0 ar03__5 0 0 ar03__6 0 0 ar03__7 0 0 ar03__8 0 0 ar03__9 0 0 ar03__10 0 0 ar03__11 0 0 ar03__14 0 0 ar03__15 0 0 ar03__16 0 0 ar03__17 0 0 ar03__18 0 0 ar03__19 0 0 hv02 0 0 hi11__1 0 0 hi11__2 0 0 hi11__3 0 0 hi11__4 0 0 hi11__5 0 0 hi12__1 0 0 hi12__2 0 0 hi12__3 0 0 hi12__4 0 0 hi12__5 0 0 hi12__6 0 0 hi12__7 0 0 xx01 0 0 -999999999 Missing 1 Less than I should know 2 A little, but not enough 3 Enough 4 A little more than most people 5 I am up to date on the latest research xx11__1 0 0 xx11__2 0 0 xx11__3 0 0 xx11__4 0 0 xx11__5 0 0 xx11__6 0 0 xx11__7 0 0 xx11__8 0 0 xx11__9 0 0 xx11__10 0 0 xx11__11 0 0 xx11__12 0 0 xx11__13 0 0 xx11__14 0 0 xx11__99 0 0 co11 0 0 -999999999 Missing 1 Got better 2 Stayed the same 3 Got worse co12 0 0 -999999999 Missing 1 Got better 2 Stayed the same 3 Got worse so12__1 0 0 so12__2 0 0 so12__3 0 0 so12__99 0 0 hv01 0 0 -999999999 Missing 1 Yes 2 No 3 Don't Know hs11 0 0 -999999999 Missing 1 Yes 2 No 3 Don't Know hs01 0 0 -999999999 Missing 1 Yes 2 No 3 Don't Know tm11 0 0 -999999999 Missing 1 Yes 2 No 3 Don't Know tm12 0 0 -999999999 Missing 1 Yes 2 No 3 Don't Know hi01 0 0 -999999999 Missing 1 Yes 2 No 3 Don't Know hi03 0 0 -999999999 Missing 1 Yes 2 No 3 Don't Know hi14 0 0 -999999999 Missing 1 Yes 2 No 3 Don't Know ch11 0 0 -999999999 Missing 1 Yes 2 No 3 Don't Know ch12 0 0 -999999999 Missing 1 In-person at school 2 Through a school-based internet program 3 Through TV/radio programs at home 4 From household members at home 5 They received no education 6 It has been school holidays ch13 0 0 -999999999 Missing 1 Yes, a lot 2 Yes, a little 3 No 4 Don't know s014 0 0 -999999999 Missing 1 Increased 2 Stayed the same 3 Decreased 4 Don't know s015 0 0 -999999999 Missing 1 Increased 2 Stayed the same 3 Decreased 4 Don't know s016 0 0 -999999999 Missing 1 Increased 2 Stayed the same 3 Decreased 4 Don't know s017 0 0 -999999999 Missing 1 Increased 2 Stayed the same 3 Decreased 4 Don't know s018 0 0 -999999999 Missing 1 Increased 2 Stayed the same 3 Decreased 4 Don't know hs12 0 0 -999999999 Missing 1 Afraid of getting medication because of COVID-19 2 Lockdown restricted me from going out 3 Unable to go out for other reasons 4 Medicine out of stock 5 Unable to afford medication 6 Other ar03__12 0 0 so11 0 0 -999999999 Missing 1 Yes 2 No 3 Don't Know ar03__13 0 0 ar03__99 0 0 ar03__100 0 0 hi12__99 0 0 hi11_99 0 0